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This book constitutes the refereed proceedings of the 13th Annual International Conference on Research in Computational Molecular Biology, RECOMB 2009, held in Tucson, Arisona, USA in May 2009. The 37 revised full papers presented were carefully reviewed and selected from 166 submissions. As the top conference in computational molecular biology, RECOMB addresses all current issues in algorithmic, theoretical, and experimental bioinformatics such as molecular sequence analysis, recognition of genes and regulatory elements, molecular evolution, protein structure, structural genomics, gene expression, gene networks, drug design, combinatorial libraries, computational proteomics, as well as structural and functional genomics.

Computational Biology --- Genomics --- Sequence Analysis --- Gene Expression --- Genetics --- Biology --- Genetic Processes --- Genetic Techniques --- Genetic Phenomena --- Biological Science Disciplines --- Investigative Techniques --- Natural Science Disciplines --- Phenomena and Processes --- Analytical, Diagnostic and Therapeutic Techniques and Equipment --- Disciplines and Occupations --- Biology - General --- Health & Biological Sciences --- Bioinformatics. --- Molecular biology --- Mathematical models. --- Molecular biochemistry --- Molecular biophysics --- Bio-informatics --- Biological informatics --- Life sciences. --- Computer programming. --- Algorithms. --- Database management. --- Artificial intelligence. --- Life Sciences. --- Life Sciences, general. --- Programming Techniques. --- Artificial Intelligence (incl. Robotics). --- Computational Biology/Bioinformatics. --- Algorithm Analysis and Problem Complexity. --- Database Management. --- Information science --- Computational biology --- Systems biology --- AI (Artificial intelligence) --- Artificial thinking --- Electronic brains --- Intellectronics --- Intelligence, Artificial --- Intelligent machines --- Machine intelligence --- Thinking, Artificial --- Bionics --- Cognitive science --- Digital computer simulation --- Electronic data processing --- Logic machines --- Machine theory --- Self-organizing systems --- Simulation methods --- Fifth generation computers --- Neural computers --- Data base management --- Data services (Database management) --- Database management services --- DBMS (Computer science) --- Generalized data management systems --- Services, Database management --- Systems, Database management --- Systems, Generalized database management --- Algorism --- Algebra --- Arithmetic --- Computers --- Electronic computer programming --- Electronic digital computers --- Programming (Electronic computers) --- Coding theory --- Biosciences --- Sciences, Life --- Science --- Data processing --- Foundations --- Programming --- Biochemistry --- Biophysics --- Biomolecules --- Computer science. --- Computer software. --- Artificial Intelligence. --- Software, Computer --- Computer systems --- Informatics

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This book constitutes the refereed proceedings of the 16th Annual International Conference on Research in Computational Molecular Biology, RECOMB 2012, held in Barcelona, Spain, in April 2012. The 31 revised full papers presented together with 5 keynote lectures were carefully reviewed and selected from 200 submissions. The papers feature current research in all areas of computational molecular biology, including: molecular sequence analysis; recognition of genes and regulatory elements; molecular evolution; protein structure; structural genomics; analysis of gene expression; biological networks; sequencing and genotyping technologies; drug design; probabilistic and combinatorial algorithms; systems biology; computational proteomics; structural and functional genomics; information systems for computational biology and imaging.

Molecular biology --- Computational biology --- Bioinformatics --- Biology --- Engineering & Applied Sciences --- Health & Biological Sciences --- Biophysics --- Computer Science --- Mathematics --- Statistical methods --- Molecular biochemistry --- Molecular biophysics --- Computer science. --- Data structures (Computer science). --- Computers. --- Algorithms. --- Database management. --- Artificial intelligence. --- Bioinformatics. --- Computer Science. --- Algorithm Analysis and Problem Complexity. --- Computational Biology/Bioinformatics. --- Database Management. --- Computation by Abstract Devices. --- Artificial Intelligence (incl. Robotics). --- Data Structures. --- Bio-informatics --- Biological informatics --- Information science --- Systems biology --- AI (Artificial intelligence) --- Artificial thinking --- Electronic brains --- Intellectronics --- Intelligence, Artificial --- Intelligent machines --- Machine intelligence --- Thinking, Artificial --- Bionics --- Cognitive science --- Digital computer simulation --- Electronic data processing --- Logic machines --- Machine theory --- Self-organizing systems --- Simulation methods --- Fifth generation computers --- Neural computers --- Data base management --- Data services (Database management) --- Database management services --- DBMS (Computer science) --- Generalized data management systems --- Services, Database management --- Systems, Database management --- Systems, Generalized database management --- Algorism --- Algebra --- Arithmetic --- Automatic computers --- Automatic data processors --- Computer hardware --- Computing machines (Computers) --- Electronic calculating-machines --- Electronic computers --- Hardware, Computer --- Computer systems --- Cybernetics --- Calculators --- Cyberspace --- Information structures (Computer science) --- Structures, Data (Computer science) --- Structures, Information (Computer science) --- File organization (Computer science) --- Abstract data types (Computer science) --- Informatics --- Science --- Data processing --- Foundations --- Biochemistry --- Biomolecules --- Computer software. --- Data structures (Computer scienc. --- Artificial Intelligence. --- Software, Computer --- Data structures (Computer science)

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Molecular biology --- Biologie moléculaire --- Computer simulation --- Congresses. --- Simulation par ordinateur --- Congrès --- Genomics --- Computational Biology --- Sequence Analysis --- Gene Expression --- Genetic Processes --- Genetic Techniques --- Biology --- Genetics --- Biological Science Disciplines --- Investigative Techniques --- Genetic Phenomena --- Phenomena and Processes --- Analytical, Diagnostic and Therapeutic Techniques and Equipment --- Natural Science Disciplines --- Disciplines and Occupations --- Computer Science --- Biophysics --- Engineering & Applied Sciences --- Health & Biological Sciences --- Molecular biochemistry --- Molecular biophysics --- Computer science. --- Data structures (Computer science). --- Algorithms. --- Computer science --- Database management. --- Artificial intelligence. --- Bioinformatics. --- Computer Science. --- Algorithm Analysis and Problem Complexity. --- Data Structures. --- Discrete Mathematics in Computer Science. --- Database Management. --- Artificial Intelligence (incl. Robotics). --- Mathematics. --- Bio-informatics --- Biological informatics --- Information science --- Computational biology --- Systems biology --- AI (Artificial intelligence) --- Artificial thinking --- Electronic brains --- Intellectronics --- Intelligence, Artificial --- Intelligent machines --- Machine intelligence --- Thinking, Artificial --- Bionics --- Cognitive science --- Digital computer simulation --- Electronic data processing --- Logic machines --- Machine theory --- Self-organizing systems --- Simulation methods --- Fifth generation computers --- Neural computers --- Data base management --- Data services (Database management) --- Database management services --- DBMS (Computer science) --- Generalized data management systems --- Services, Database management --- Systems, Database management --- Systems, Generalized database management --- Computer mathematics --- Discrete mathematics --- Algorism --- Algebra --- Arithmetic --- Information structures (Computer science) --- Structures, Data (Computer science) --- Structures, Information (Computer science) --- File organization (Computer science) --- Abstract data types (Computer science) --- Informatics --- Science --- Data processing --- Mathematics --- Foundations --- Biochemistry --- Biomolecules --- Computer software. --- Data structures (Computer scienc. --- Computational complexity. --- Artificial Intelligence. --- Complexity, Computational --- Software, Computer --- Computer systems --- Computer science—Mathematics. --- Molecular biology - Computer simulation - Congresses.

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This volume contains the papers presented at the 9th Annual International Conference on Research in Computational Molecular Biology (RECOMB 2005), which was held in Cambridge, Massachusetts, on May 14–18, 2005. The RECOMB conference series was started in 1997 by Sorin Istrail, Pavel Pevzner and Michael Waterman. The list of previous meetings is shown below in the station “Previous RECOMB Meetings. ” RECOMB 2005 was hosted by the Broad Institute of MIT and Harvard, and Boston University’s Center for Advanced Economic Technology, and was excellently organized by the Organizing Committee Co-chairs Jill Mesirov and Simon Kasif. This year, 217 papers were submitted, of which the Program Committee collected 39 for presentation at the meeting and inclusion in this proceedings. Each submission was refereed by at least three members of the Program Committee. After the completion of the referees’ reports, an extensive Web-based discussion took place for making decisions. From RECOMB 2005, the Steering Committee decided to publish the proceedings as a volume of Lecture Notes in Bioinformatics (LNBI) for which the founders of RECOMB are also the editors. The prominent volume number LNBI 3500 was assigned to this proceedings. The RECOMB conference series is closely associated with the Journal of Computational Biology which traditionally publishes special issues devoted to presenting full versions of selected conference papers. The RECOMB Program Committee consisted of 42 members, as listed on a separate page. I would like to thank the RECOMB 2005 Program Committee members for their dedication and hard work.

Algorithms. --- Data structures (Computer science). --- Computer science—Mathematics. --- Database management. --- Artificial intelligence. --- Bioinformatics. --- Algorithm Analysis and Problem Complexity. --- Data Structures. --- Discrete Mathematics in Computer Science. --- Database Management. --- Artificial Intelligence. --- Computational molecular biology --- RECOMB

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This volume contains the papers presented at the 9th Annual International Conference on Research in Computational Molecular Biology (RECOMB 2005), which was held in Cambridge, Massachusetts, on May 14–18, 2005. The RECOMB conference series was started in 1997 by Sorin Istrail, Pavel Pevzner and Michael Waterman. The list of previous meetings is shown below in the station “Previous RECOMB Meetings. ” RECOMB 2005 was hosted by the Broad Institute of MIT and Harvard, and Boston University’s Center for Advanced Economic Technology, and was excellently organized by the Organizing Committee Co-chairs Jill Mesirov and Simon Kasif. This year, 217 papers were submitted, of which the Program Committee collected 39 for presentation at the meeting and inclusion in this proceedings. Each submission was refereed by at least three members of the Program Committee. After the completion of the referees’ reports, an extensive Web-based discussion took place for making decisions. From RECOMB 2005, the Steering Committee decided to publish the proceedings as a volume of Lecture Notes in Bioinformatics (LNBI) for which the founders of RECOMB are also the editors. The prominent volume number LNBI 3500 was assigned to this proceedings. The RECOMB conference series is closely associated with the Journal of Computational Biology which traditionally publishes special issues devoted to presenting full versions of selected conference papers. The RECOMB Program Committee consisted of 42 members, as listed on a separate page. I would like to thank the RECOMB 2005 Program Committee members for their dedication and hard work.

Algorithms. --- Data structures (Computer science). --- Computer science—Mathematics. --- Database management. --- Artificial intelligence. --- Bioinformatics. --- Algorithm Analysis and Problem Complexity. --- Data Structures. --- Discrete Mathematics in Computer Science. --- Database Management. --- Artificial Intelligence. --- Computational molecular biology --- RECOMB